Sentence examples for secondary conservation from inspiring English sources

In the presence of walls, boundary conditions that ensure primary conservation have been derived, while secondary conservation is shown to remain satisfactory.

Unlike other fluid dynamics models, LES accuracy is intricately linked to so-called primary and secondary conservation properties of the numerical discretization schemes.

Despite the caveat of lacking known structural data relating to the ferlins, sequence alignment with synaptotagmin C2 domains reveals high sequence and secondary structure conservation, with identifiable conservation of calcium-binding residues within many ferlin C2 domains.

Each candidate shows a highly conserved H box and ACA motif as well as high secondary structure conservation with two separate stem loop regions.

We predict about 3400 human-mouse conserved candidate miRNA genes, many of which show evidence of sequence and secondary structure conservation across all vertebrates (including fish) and are supported by independent evidence not used by our prediction method.

We chose cgb_00105 (upstream of cg0010) as an example of a sRNA with strong secondary structure conservation as shown above (Table  2; Figure  5b) and cgb_20715 (downstream of cg2071) as an example lacking secondary structure conservation.

Being fundamental functional RNA elements, many pre-miRNAs have maintained sequence and secondary structure conservation across large evolutionary distances.

Our rationale was that those lncRNAs (> = 200 nucletoides) that are expressed in human and mouse and preserved in distant relatives, plus that show features of primary sequence and secondary structure conservation, are likely to be functional.

To measure secondary structure conservation beyond rodents and hominids, we obtained a multiple alignment between mouse genome assembly mm7 (NCBI Build 35) and fifteen other vertebrate genomes from the UCSC Genome Browser Database [64].

As one of the features for SVM2, we therefore used predicted hairpin secondary structure conservation between each candidate mouse region and the most evolutionary distant genome that it could be aligned to, considering eleven vertebrate genomes at distances ranging from dog and cow to fish (see Methods).

Of our predictions for the mouse genome, 68% were aligned to the genome of an organism at an evolutionary distance ranging from dog and cow to (any of the) fish and showed predicted secondary structure conservation with that organism (Figure 4).