Sentence examples for second round of alignment from inspiring English sources

The detected junctions in each sample were pooled as raw junctions for the second round of alignment (default parameters and '--no-novel-juncs').

The aberrant sequences were then removed, and the second round of alignment were performed by SATé-MAFFT [ 14] for the filtered sequences to create the final multiple sequence alignments.

The hairpin (precursor) sequences of the cattle miRNAs with mature sequences that showed no more than two mismatches in the previous alignment step were then selected for a second round of alignments against the 57 vertebrate genomes.

The first round of alignment was performed using SATé + PRANK, and the second round was performed using SATé + MAFFT.

In the first round of alignment, SATé-Prank [ 14] was employed to obtain the initial alignments, which were used to identify the aberrant over-aligned and under-aligned sequences.

Since the first round of alignment was against the D8 reference, restricting subsequent iterations to visit D8-related positions preserved the initial alignment of the particles against the reference while allowing the internal density to converge within the frame of TRiC after 17 iterations.

These human genes, which were missed in our previous study due to the stringent requirement for at least three tandem ZNF-encoding motifs in the sequence in those genome scans, were retrieved from NCBI for a second round of fingerprint alignments.

While predicted heterozygous sites are not included in the initial reference genome customization (Fig.  1, Box 1) or sequence alignment steps (Fig.  1, Box 3), they can be added in a second round of reference customization and alignment if desired.

An HMM was then derived from a multiple alignment of these sequences and used to query this region of MMU4 in a second round of searches.

In the second round of classification, the remaining sequences were grouped according to the identity matrix calculated from the multiple sequence alignments.

Then came the second round of gunshots.