Sentence examples for second haplotype block from inspiring English sources
We therefore also tested our traits of interest for association with an additional 14 tagging SNPs capturing the LD contained within a second haplotype block located upstream (Figure 3).
A second haplotype block encompassing rs1056836 and rs1800440 was present in this race/ethnic sample group.
The second haplotype block 2 containing two SNPs rs132841890 and rs134752210 was also significantly associated with resistance to bTB (F-test 25.63; P-value 4.8 × 10−7).
The first haplotype block 1 containing 15 SNPs—rs109910368 to rs137562332 was significantly associated with resistance to bTB (F-test 23.28; P-value 1.6 × 10−6).
From the figure, it can be seen that about 50% of all SNV sequences contain the combination of haplotypes ACCGTGA in the first two haplotype blocks, and the third haplotype block consists of 125 SNVs, but has only 17 common haplotypes (instead of the theoretical upper bound of 2).
A third common haplotype block carrying the common alleles of variants rs7903146 and rs12255372, but the rare allele of variant rs11196205 was not associated with the presence of CAD.
We constructed the first soybean haplotype block maps in the wild, landrace, and North American cultivar populations and observed that most recombination events occurred in the regions between haplotype blocks.
The second duplication-containing haplotype block has a characteristic allele that is never observed in the analogous region in any of the other duplicated or non-duplicated strains.
The region near to 30.65 Mb was more interesting: a SNP at 30,650,629 is polymorphic such that the second duplication-containing haplotype block (the one that includes the A/J strain) differs from all other duplicated strains.
Second, a different haplotype block was identified when comparing black and white individuals; this block consisted of one SNP within TTC12 (rs2303380) and three in ANKK1 (markers rs4938012, rs4938015, and rs11604671).
Note that the second through sixth SNPs cover a large haplotype block in European Americans that spans much of CYPA4.
