For example, Willison (2006) developed a crime script corresponding to a single instance of crime based on a single account.
We assume the reader to be familiar with the notion of edit script corresponding to the min-cost path and how to recover an LCS from an edit script [ 28- 30].
Reads were then interrogated using custom Python scripts to identify sequences corresponding to a full-length or truncated L1 5′ end and also aligning to one of the 20 putative integration sites.
A custom script extracted the longest assembled sequence corresponding to each exon and constructed matrices for multiple sequence alignment, while adding Ns to the matrix if an exon was missing for a particular species.
One hundred scripts (realization) were run, and the base case corresponding to the P50 probabilistic results to use in simulation production models was chosen.
A set of command line scripts is provided to enumerate all possible structures corresponding to the specified lipid abbreviations without any additional input requirements from the user.
An in-house script was used to generate Gene Transfer Format (GTF) files corresponding to the predicted and experimentally validated gene models from BLAT alignments of the CDS to the Arabidopsis genome.
Matlab scripts were developed for the calculation of all the additional fields corresponding to parameters of vulnerability.
A customized GFF3 v3 file and FASTA files corresponding to each gene were generated using custom PERL scripts.
