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Within several years, though, low-cost computer retailers appeared and began selling script software.
Spacer sequences were extracted from both genomes using perl script software.
The Resolve Script software developed to deconvolute the sorghum pool data [ 31] was modified to accommodate our pool dimensions.
150 nuclei from three independent experiments were imaged and analysed with an erosion script software to locate the position of the locus (2).
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Statistical analysis was performed using IBM SPSS statistical software version 20.0 (IBM Corp., New York, NY, USA) and processed for pre-analysis using Matlab scripting software (Mathworks Inc., Natick, MA, USA).
In SilicoFragmentation automatically controls the operation of Mass Frontier by using the open-source visual scripting software Sikuli.
31 44 45 A series of scripts were developed by the Centre's GIS team to compute the GIS environment measures using PYTHON v2.6, 46 a scripting software compatible with ArcGIS v10.
Data were analyzed and visualized using IBM SPSS statistical software Version 21.0 (IBM Corp., New York, NY, USA) and processed for preanalysis using Matlab scripting software (Mathworks Inc., Natick, MA, USA).
To predict modified motifs, we screened the Modifications.gff file by using publicly available R-scripts software (https://github.com/PacificBiosciences/motif-finding), as well as an online motif finding server (MEME, http://meme.nbcr.net/meme/cgi-bin/meme.cgi) [ 38].
Unfortunately, and to some extent surprising, bioinformatics analyses are often not fully reproducible due to inaccessibility of tools (keyword "in-house script") or software versions used.
All analyses were conducted using a common statistical protocol and STATA script (Stata software, version 11; StataCorp, College Station, TX, USA).
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