Sentence examples for script pipeline from inspiring English sources

He sent it around to agents and managers, who were encouraging, and it then won first place in 2008's Script Pipeline contest.

We used the selected dominant sequences as the query dataset of potential mature miRNAs to run the Perl script pipeline against all the remaining clean sequence reads.

A custom Perl script pipeline was created to run the mpileup, bcftools, and rmdup commands of the samtools package.

Both the coding, as well as non-coding regions were passed through a Perl script pipeline that identified the homologous (conserved) sequences or strain specific sequences based on an arbitrary BLASTN cut-off E-value of e-10 (83% sequence identity).

First the script pipeline.bds (Fig. 2A) is compiled to an AST structure (Fig. 2B) using ANTLR (Parr, 2007).

Unix shell script pipelines, input files and result files are included as Additional file 2 for the first three examples.

Pan-Genomes Analysis Pipeline (PGAP) is a perl-script pipeline that consists of orthologous gene clustering, pan-genome analysis, SNP in CDS calling, evolutionary analysis and COG distribution.

This makes them readily available for third-party programs and, with the help of included Perl-interface, to elaborate scripting pipelines.

Secondly, the interactive programs were to be used mostly in (shell-script) pipelines, hence they use a simple command-line interface and, where possible, they read from and write to a stream.

Indeed, the functional components encapsulate code written by someone who has a good knowledge of one or more programming languages (e.g., Java for KNIME, specific script for Pipeline Pilot).

Here we present an easy-to-use bash-script-based pipeline that allows the user to automatically process sequencing files for single or multiple individuals.