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Multi locus sequence types (MLST) were assigned using a bash script applied to assembled Illumina data.
The syntenies were obatined using a Perl script applied to BBH data.
This script applied the same distance calculation algorithm as JoinMap 3.0.
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We conducted the pairwise RMSD calculation for the respective molecules of the datasets between Maestro and MOE schemes by employing in-house python script applying the "smart_rms" function of GOLD.
The script applies a maximum clique algorithm.
Therefore, the standard manufacturer HR-pQCT evaluation script applies a correction factor to these parameters to adjust for known differences.
The script applies a χ2 test (test procedure identical to the χ2 test implemented in TREE-PUZZLE [ 41]) and proceeds with excluding sequences with a base composition that significantly deviates until all sequences show compositional homogeneity [XI].
You could also add "Citizen Kane" to the list of old-style heroes with new-style narrators, of course, and that raises an issue with the idea of these scripts: the scripts apply to scripts, as much as to books, and therefore seem just to be stories that work, rather than something peculiar to the novel.
This paper presents the development of a user evaluations based quality model for conceptual modelling scripts applying Seddon's variant of the well-known model of DeLone and McLean [W.H. DeLone, E.R. McLean, Information systems success: the quest for the dependent variable, Information Systems Journal 3(1992 60 9560–95] for evaluating the success of information systems.
Genotypes were called based on the same metric as Bruse et al [16] but initial clustering analysis was conducted by in-house Ruby 1.8.6 scripts applying the AI4R library (http://ai4r.rubyforge.org/) clustering routines and the Tioga graphics library (http://www.itp.ucsb.edu/~paxton/tioga.html).html
Once early discussions of variables to be paired and harmonized between datasets had begun in the xTEND project, the development of automated tools for the generation of scripts applying discussed variable pairing and harmonization rules was undertaken so that these rules were applied in a consistent fashion that could be audited.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com