Exact(5)
The overall gradual increase in entropy over the three decades in many of the protein sequences, most apparent in the highly conserved sequences, is an indication of the continuing genetic evolution of the viruses as well as improved screening of sequence variants.
Predicted RTX proteins identified by bioinformatic screening of sequence databases.
For screening of sequence variants in a normal population, leukocyte DNA from 135 unrelated healthy individuals was used.
It is the latter strategy that holds great potential for the future by screening of sequence databases to identify genes of interest, after which the targeted genes are codon-optimized and synthesized before being expressed in the target host.
It is therefore not possible to exclude that the C. tuberculosum 4CL genes clustering with roseobacters represent bacterial contamination present in its genome sequence, despite systematic screening of sequence data to remove it [ 56].
Similar(54)
Further screening of sequences for vector contaminations and adapters were performed using NCBI Univec and VecScreen.
After sequence trimming for adapter removal and screening of sequences based on quality and ambiguity scores, 735,507 reads remained with an average length of 320.98 bp.
A first screening of sequences from different Australian populations highlights that LcMSTN-1 is variable in the 5' flanking region, where four SNPs have been identified.
Our results, derived by sequencing monoclonal TCR CDR3 chains, indicate that an error rate >1% and as high as 6% can be expected after Illumina® sequencing of a 30-36 nt CDR3 central to a 125 bp read, even after screening of sequences for identity with established TCR sequence 5' and 3' of the CDR3.
Furthermore, screening of published sequence databases revealed sequences with highest similarity to WSSV and the newly described virus in genomic libraries of at least three further decapod species.
To search for particular protein families, the amino acid sequence motifs suitable for selective screening of nucleotide sequence databases may be used.
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