aThe APACHE II score was incremented under consideration of the NRBC concentration as follows: NRBC 0/μl: +0, NRBCs 1 to 100/μl: +4, NRBCs 101 to 200/μl: +8, NRBCs more than 200/μl: +1200/μl
The normalization takes into account any significant differences between scores of edges under consideration.
The performance depends on the topological structure of network and confidence scores of interactions under consideration.
For Rd.HMM to serve as a good quality-assessment tool, the target score for the model under consideration should be known in advance.
The correlation coefficients should be higher between the item and the dimension to which it belongs (calculating the score without the item under consideration) than between that item and the other dimensions.
When the TM-score of two proteins under consideration falls into [0.65, 0.80], our method outperforms HHalign by ∼3.3% in terms of the reference-dependent accuracy and by ∼7.6% in terms of the reference-independent accuracy.
The cscore of a precursor candidate is given by the product of the significance of each measure value against the respective empirical distribution in the artificial genome, i.e., the proportion of candidates in the artificial genome which have worse scores than the candidate under consideration.
For example, if there are three concepts with the same score, and there are two items with a lower and three items with a higher score than the three items under consideration, the three items should all be assigned rank 3. Let f(c j ) be an evaluation function that assigns a score to concept j.
The idea is that each criteria weight would be multiplied by the score given to the option under consideration.
Outliers were identified by inspecting the z score plot of the variable under consideration, and were checked carefully for possible mistakes of data recording and/or transfer.
