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Phylogenetic evidence for recombination was tested for the genomic sequences using the split-decomposition method implemented in SPLITSTREE version 4.11.3 [30] using the general time reversible (GTR) scheme of substitution with a gamma distribution (Γ4) model of site rates variation (GTR + Γ4) (see below for a justification of this choice).
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Consequently, the data were analyzed using the GTR + Γ4 scheme of nucleotide substitution.
The new scheme introduces the concept of substitution of noisy pixels by linear prediction prior to estimation.
We have developed a new analysis scheme for determining degrees of substitution in starches acylated with fatty acids.
By means of a numerical simulation, given the characteristics of soft rock deformation and damage at great depth, a new support substitution scheme of SFRC to replace plain concrete is proposed.
First we consider a new scheme of visualizing variation in substitution rates amongst genes and lineages which uses a matrix of gene tree branch lengths.
While Caesar's was the first recorded use of this scheme, other substitution ciphers are known to have been used earlier.
Two critical prerequisites were a mutagenic scheme of random single-nucleotide substitutions and independent isolation of different mutant alleles.
The proposed scheme is based on a new concept of substitution prior to estimation.
Partition schemes were again calculated with PartitionFinder 1.1.1 [ 101], for identified models of substitution see Table 4.
Scheme 3 Nucleophilic substitution of a pyridine ring.
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