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Indeed, our schema includes a fact called RSS feeds which is measured using the number of feeds denoted as FeedsNB.
In analogy to a data warehouse architecture, the schema includes components for data extraction, transformation and loading, as well as meta data repositories describing data and algorithms.
The schema includes distinguished types for generic 'biosequence', nucleotide or amino-acid sequence, unambiguous or general.
The schema includes both fundamental domain concepts and, importantly, significant relations connecting these concepts.
In our method, the database schema includes metadata describing the experiments.
The BIND schema includes a number of custom CVs needed where no standard CVs were available at the time.
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SHED is a pharmacophore-based descriptor schema including 4 pharmacophore definitions hydrophobic, donor, acceptor and aromatic as well as 10 pairwise descriptors.
The people responsible for developing a database schema and those who write application programs for use by technologically unsophisticated users typically have knowledge of and access to the entire schema, including direct access to the database's base tables.
Some applicants merely describe a plan to deposit the data in some web-based public resource, which may or may not be appropriate, have sufficient resources, have a suitable meta-data schema, include compatible ontologies or accommodate adequate data provenance.
The LaMEVE database structure is outlined in Figure 1 with a full schema included in a supplementary file (see Additional file 1). Figure 1 Conceptual diagram showing the current structure of the LaMEVE database.
Although in our system query flock technique can be applied to a data base schema including both the intensional data base (IDB) or rules and the extensible data base (EDB) or tabled relations, we have designed an architecture to compile query flocks from datalog into SQL in order to be able to use commercially available data base management systems (DBMS) as an underlying engine of our system.
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