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CT scans were analyzed using density contour software.

Scans were analyzed using GenePix Pro versions 4.0.1.9 and 4.1.1.4.

Scans were analyzed using Hologic Discovery software (version 12.1).

[F]HX4 PET/CT scans were analyzed using an Inveon Research Workplace (Edition 4.0.0.3; Siemens, Germany).

Event-related scans were analyzed using the general linear model and the "Finite Impulse Response" approach.

For intraobserver variation, the 3 × 3 scans were analyzed using the interclass correlation coefficient.

The scans are analyzed using contour mode 2 (45%) and peel mode 1 to assess total (TB) and trabecular bone (Trab) parameters at the 4% site.

Image files generated after scanning were analyzed using NimbleScan Software Version 2.4.

They were subsequently scanned on a GeneChip® 3000 Scanner (Affymetrix), and the data from each scan were analyzed using GeneChip® Resequencing Analysis Software, Version 4.0 (GSEQ v4.0, Affymetrix).

Results of the genome scan were analyzed using a regression analysis implemented in QTL cartographer (Basten et al., 1996).

Each scan was analyzed using the Hologic prosthetic scan analysis software (operating system 9.80; v. 8.26a:3).