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The normalized expression values (on a log-2 scale) of probes representing the same gene were averaged.
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The parallel (in some particular case, nearly parallel) stretch of ordinate with varying magnitude of abscissa implies that distribution of the property (plotted in ordinate) at that particular scale of probing the system, in invariant.
The match scales are considered to be the operator scales of probe and gallery images, at which the change in number of stable pixels are within a certain match criteria.
The software can support a large-scale search of probe hits against a comprehensive microbial sequence database.
Additional file 7 is a supplementary figure showing that quality control and scaling of microarray probes can be done well with as few as 16 matched RNA-Seq samples.
After quality control, signal intensity ratio of each probe was converted into log2 scale with the positions of probes.
At the scale of the Raman probe, the FLG coverage ranges from two to seven graphene planes, with an average of two to three graphene planes.
Physically, the Deborah number is the ratio of relaxation time characterizing the time it takes a material to adjust to applied stresses or deformations, and the characteristic time scale of an experiment probing the response of the material.
Recognizing the length-scale of the probe used for structural characterization is very important for the interpretation of the results.
After scaling of all probe sets to a value of 100, the amplification scale was reported to be inferior to 3.0 for all slides.
Initial data analysis was performed using Affymetrix Microarray Suite v5.0 software, setting the scaling of all probe sets to a constant value of 500 for each GeneChip.
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