In another strain of this species, R. flavefaciens 17, previous studies have shown direct functional evidence for four specific interactions: (i) EndB-type dockerins with ScaA-type cohesins; (ii) the ScaB dockerin with the ScaE cohesin; (iii) the ScaA dockerin with ScaB-type cohesins; and (iv) the CE3B dockerin with the ScaC cohesin (Jindou et al 2006).
Significantly, the predicted recognition residues of the type I ScaB dockerin is different from all other type I dockerins in C. clariflavum.
Compared to R. flavefaciens 17, however, differences were observed at the level of modular organization with the R. flavefaciens FD-1 ScaA protein carrying one fewer cohesin module than ScaA from R. flavefaciens 17, and with the FD-1 ScaB protein exhibiting two types of cohesin [28].
The scabs, the stereo-types, persist as reminders of the wounds inflicted by the colonizer, and, in Joyce's view, the continued picking at them will never allow a healthy and whole Irish identity to form.
The ScaB cohesins were classified bioinformatically as type II cohesins and were thus expected to interact with type II dockerins.
The anticipated exception to this rule was the type I dockerin of the ScaB adaptor scaffoldin which bound selectively to the type I cohesins of ScaC and ScaJ.
Sheep scab is classically associated with a Th2 type response, supported by infiltration of CD4+ T-cells and γδ-T-cells, combined with a lack of CD8+ T-cell infiltration and an influx of eosinophils and mast cells [ 71].
The chive plants will prevent a type of disease called 'apple scab' from occurring on the trees.
A common distress type of chip seals is scabbing (loss of aggregate) which is caused by insufficient adhesion between aggregate and binder.
A type I dockerin was taken from ScaB, and another dockerin was taken from the GH48 enzyme [YP_005048367.1] of C. clariflavum.
However, the studies also revealed that ScaB from the FD-1 strain is comprised of two divergent cohesin types, unlike ScaB from strain 17, which is comprised of a single cohesin type.
