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This allowed obtaining a sequence of progressively coarsened nanoporous Au samples with correlated structure.
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In the EPICOR sample, 25,376 regions with correlated methylation levels were identified with the A-clustering algorithm [ 24] and subsequently tested for differential methylation between cases and controls (see the " Methods" section): the top-ranking 6 DMRs are reported in Table S1 (Additional file 2).
The amounts of CEC detected in 50 blood samples with both methods correlated significantly (r=0.6744, P<0.001).
Structure v. 2.3.3 analyses were conducted with and without prior information about population samples and admixture, and with correlated and uncorrelated allelic frequencies.
They proposed a method to compute sample sizes for studies with correlated observations based on the generalized estimating equation (GEE1) approach [ 7].
DFR expression was higher in the northern samples and correlated with PAL, CHS and anthocyanin levels.
TCF12 protein expression was upregulated in cancer samples and correlated with progression free survival.
Expression patterns of the selected genes were validated by real time PCR on osteosarcoma patient tumor samples and correlated with clinical and pathological data.
Anthocyanins were more abundant in Alaskan samples and correlated with flavonoid genes including DFR (r = 0.91), UFGT (r = 0.94) and F3H (r = 0.77).
Artificial neuronal network analysis combined with data from literature and previous work produced a panel of putative PCa progression markers, which were used in a transcriptomic analysis of 29 radical prostatectomy samples and correlated with clinical outcome.
To identify possible mediators of MFG-E8, the mRNA expression of fractalkine and CX3CR1 was analyzed by QRT-PCR in all chronic pancreatitis tissue samples and correlated with MFG-E8 mRNA expression.
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