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Within the water column of the submarine spring conduit, there were no significant differences of the sampled parameters over short sampling distances (<400 m) and periods (<1 h).
In each iteration, we compute the I/O monetary cost for the randomly sampled parameters (i.e., lines 7 8 in Algorithm 5) and update the configuration parameters that will be used by the job, only if we are able to reduce the currently minimum computed I/O cost (i.e., lines 9 14 in Algorithm 5).
The proof of Lemma 1 in the Results section reveals another explanation: as we are working on sampled data to fit statistical models, we should also agree to work on sampled parameters to criticize the model.
Replicate BEAST MCMC analyses converged to the same likelihood for both lognormal and exponential calibration sets (mean posterior model log likelihood = −48906; see Methods above) and showed high (>400) ESSs for all sampled parameters.
For the final ensembles of 171 and 195 models for the split ratios of 75∶25 and 95∶5, respectively, the sampled parameters of these screened subsets were examined to determine what characteristics they exhibited that deviated from the original ensemble of models.
Parameters which have been treated in this manner shall be referred to as sampled parameters.
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Figure 5 Path dependency of 40,000 average run trajectories across sampled parameter space.
Figure 5 depicts a panel of average run trajectories across sampled parameter space.
The optimal variable stop time strategy associated with each set of sampled parameter values is calculated, and the policy that most frequently minimizes the total expected cost (over all sampled parameter values) is enacted at the next time step.
We calculated it within the MCMC algorithm as the ratio of the two species infectiousness for each sampled parameter point.
We ran the MCMC chain for 1,050,000 iterations and sampled parameter values every 100 iterations, discarding the first 50,000 iterations as burnin.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com