Sentence examples for sample we generated from inspiring English sources

For each sample, we generated pileup files and used them for visual confirmation of novel variant calls.

In order to delineate which of the bacterial and host-associated study variables contributed to the species diversity per sample, we generated a multivariate PLS (Projection to latent structures by means of partial least squares) model using 166 X variables (133 bacterial species and 33 host-associated variables) and one Y variable (number of different species per sample) (Figure 2A, B, C).

For each pair of WGA and non-WGA sample, we generated de novo variation calls simultaneously.

To achieve comprehensive coverage for each sample, we generated ~25 30 million single end reads.

For each sample we generated a file with the sequences (.fasta) and the corresponding file with the quality scores (.qual).qual

Using the total number of errors/variants counted per sample, we generated a normalized error score for each enzyme or library-preparation method.

First, we draw the symbol sample, and then for each symbol sample, we generate a phase sample: (24).

For comparison between samples we generated normalized clonality values (NC values) where the most clonal integration within each sample was normalized to a value of 1 (Fig. 2c).

To further evaluate the performance of the approach on a larger set of samples, we generated in silico patterns by randomly combining from 2 to 6 single strain SSR patterns from the reference strain collection (1000 patterns for each combination).

In other words, for the presented results in Tables 3 and 4 under 'Rnd (600 samples)', we generated 600 random patches 16 times.

For one of the samples, we generated additional sequence using the cloning-independent pyrosequencing method [25] on the Roche GS20.