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MACS2 [ 49] was used for peak calling using default settings, the input sample specified as the control file (-c), the -f parameter set to process paired-end BAM files (-f BAMPE), a band width of 200 bp (--bw) and a q-value of 1e−2 or 1e−10 (-q).
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Using an analysis of variance (ANOVA) model, "dye", "hybridization date" and "sample" were specified as factors together with the factor of interest, "treatment" ("parental" minus "resistant").
Moreover, the crystallite sizes calculated from the XRD main peak of all TiO2 samples were specified as nanocrystals.
EM estimation of inbreeding coefficient: an estimate or prior belief for the inbreeding coefficient for each sample may be specified as input to the program and in this case this value will be used when calculating the prior distribution in Equation (2) and posterior probabilities via Equation (3).
The stratum sampling rates were specified as being equal to the actual percentages observed in the arthritis with anemia cohort.
The reason is that the classifier can only recognize the majority-count samples that are specified as the positive type target in our experiment.
Laboratory data for blood samples drawn in acute situations are specified as "emergency laboratory", as these blood samples are processed in a different laboratory, and thus these samples were excluded for diabetes diagnosis.
The minimum sample size for each leaf (node) was specified as n = 50, and branching was limited to five levels.
Working under optimum conditions specified as: SCMNPs modified with salicylic acid, sorbent contact time and sample 10 min, mechanical stirring time 57.3 min.
The permissible limit of K+ for drinking water is specified as 12 mg/L as per WHO (1990) and 8.82% of the samples are above this limit.
PMIDs: references are specified as PubMed IDs.
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