Identifiers from the Gene Expression Omnibus Database have been used for each sample, experiment and platform.
The list of chromosomal positions and the number of paired reads supporting them, broken down by sample (experiment and index), constitutes the data from which the presence/absence genotype of a putative Alu insertion in a sample is judged.
File format: Microsoft Excel (.xlsx) spreadsheet Title: Details of all SRA/ENA/DDBJ accessions for input read data Description: This spreadsheet contains identifiers for all Project, Study, Sample, Experiment, and Run accessions for bird, fish, and snake input read data.
A model of quarry identification, sampling, and characterization is drawn from work on Rapa Nui (Easter Island), and the fundamental precepts are outlined for future sampling experiments and provenance work in stone quarries generally.
Because the 10-fold CV results from the previous section give insufficient samples (i.e. only 10 samples), we instead use 50 bootstrap sampling experiments and use the results to compute the P-values.
In the powdered sample experiments, rock particles and the reaction solution have full contact, leading to an increased reaction rate and to the reaction reaching equilibrium faster.
In each case, the three panels separate all possible pairs of sample 1A experiments, all possible pairs of sample 1B experiments, and all possible pairs of sample 1A and 1B experiments.
Hence, it is more appropriate to use the data from re-solidified sample experiments during experimental data workup and analysis.
Comprehensive information on samples, experiments, probes and genes were stored in a mySQL relational database.
