Suggestions(2)
Exact(2)
The second reason is that high-density rice linkage maps have already been constructed using the same cross combination (Kurata et al. 1994; Harushima et al. 1998).
Base on the studies on the rice linkage disequilibrium decay at the Xa5 locus (100 kb) (Garris et al. 2003) and in different Oryza species (40 500 kb) (Mather et al. 2007), we selected the associated regions using the following standard: ≤ 250gwkb with at least three significant SNPs (p-value ≤ 1E-5).
Similar(58)
The rice bean linkage map was compared with an azuki bean linkage map (Han et al., 2005) by the distribution of common azuki bean SSR markers (Fig. 3).
Rice molecular linkage map obtained from 107 SSR and STS markers of 151 F2 3 mapping population of the cross combination Jaya × CR2711 76.
Nevertheless, using the tools of biotechnology, it is possible to transfer or pyramid valuable genes of BB resistance into rice without linkage drag (Rajpurohit et al.2011; Shanti et al.2010; Singh et al.2001; Sundaram et al.2008).2008
The QTLs were placed on a framework map based on cross map comparison among the three rice genetic linkage maps.
The present rice bean linkage map is the first to be constructed from a large population derived from an intraspecific cross.
Two rice genetic linkage maps, the Cornell RFLP map and the Cornell SSR map, were used to compare QTL locations found in the present study.
Out of 172 azuki bean SSR markers mapped on the rice bean linkage map, 129 were common to those used in the azuki bean map.
Although the present rice bean linkage map was based on an intraspecific BC1 F1 cross population (rice bean/wild rice bean//rice bean), 61 markers still showed segregation distortion (P < 0·05, 18·7 %).
The rice genetic linkage map of Temnykh et al. [ 19] was used as a reference map, on which the markers of 15 studies were projected to develop a consensus map.
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