Sentence examples for retrieved from the structure from inspiring English sources
The probability distribution [ln P(D)] and Δ K were retrieved from the STRUCTURE HARVESTOR software (Earl and vonHoldt 2012).
After the fingerprint residues have been identified, their appearance in the remainder of structurally aligned proteins is sought and protein structures that share a locally similar interaction pattern with the query protein are retrieved from the structure-based sequence alignment.
A comparison of Hirshfeld surface in the complex with similar structure retrieved from the Cambridge Structural Database (CSD) has been presented.
Finally, some X-ray crystal structures retrieved from the Cambridge Structural Database (CSD) were selected to provide experimental evidence of present halogen bonds.
In addition hydrophobic and anion π noncovalent interactions play a key role in stabilizing the 3D architectures of the compounds, which have been energetically studied using theoretical calculations and compared with similar structures retrieved from the Cambridge Structural Database (CSD).
Detailed structural analysis was performed for crystal structures of complexes retrieved from the Cambridge Structural Database (CSD) (version 5.25) and compounds recently characterized by our group.
For the latter website, the 12S rRNA structure was retrieved from the "Current 12S rRNA Structures" section and the 16S rRNA was retrieved from the "Appendix to a large rRNA folding manuscript" section.
The 3D-structural similarity information of the Lin0012 protein from Listeria innocua (PDB ID: 3k17) with the existing crystal structures was retrieved from the Research Collaboratory for Structural Bioinformatics – Protein Data Bank [26] that uses the FATCAT method for flexible structural alignments of proteins.
After the model file is uploaded, or the structure has been retrieved from the PDB, the website displays details on the structure including a 3D rendering with the Jmol applet.
The template sequence was retrieved from the X-ray crystal structure of Bacteroides thetaiotaomicron β-mannosidase (PDB ID: 2JE8) [ 20] using MODELLER [ 25].
Microcapsules retrieved from the subcutaneous implant maintained their structure throughout the experiment and were free of host cellular adhesions.
