Sentence examples for retrieved annotation from inspiring English sources

Annotation distribution among originated libraries was represented by Venn diagrams by computing all retrieved annotation with the VennMaster software with the default parameters.

The GOslim classification of annotated cDNA-AFLP sequences is reported in Figures 3 and 4. Level 2 annotation was chosen because representative of all retrieved annotation, and a comparison with the annotations of Arabidopsis and rice ESTs was possible.

Nevertheless, Sma3s retrieved annotations from Uniprot plant database for 48% of the transcriptome (75,772 unigenes).

For 266 transcripts of cluster k1 and 301 transcripts of cluster k2 sequence analyses retrieved annotations with expected values below 1e-20.

In order to evaluate the quality of the pre-processing step, i.e. the extraction of blocks and block groups, we measured the fraction of retrieved annotations.

The proteome annotations are divided in cross-validated annotations (i.e. independently retrieved annotations of the proteins and the transcripts are identical or similar) and not significant annotations, for which the Mascot scores were below the significance threshold.

Despite these potential limitations, the functional annotation of our assembled dataset retrieved annotations from various databases for over 61.4% of the contigs (29 194 out of the total 47 520) and 27.8% of the singletons (9311 out of the total 33 500).

Based on this module we have implemented dedicated wizards to access this data for different common use cases, for example one to retrieve annotation tables and others to retrieve Gene Ontology and KEGG pathways gene sets.

The more elaborated command is features, used for retrieving annotation over a biological entity.

(c) Browse Repeats in piRNA Clusters: users can retrieve annotation of piRNA clusters overlapping with repeats.

The BioR toolkit provides the functionality to combine and retrieve annotation from these catalogs via the command-line interface.