Sentence examples similar to retained in alignment from inspiring English sources

40% of SVRs have undergone changes in the alignments to form new equivalences although the PB-PB equivalences are preserved, while for 40% SVRs, the equivalences are retained in the alignment (see Figure S4B).

These overhangs are soft-clipped and the sequence is retained in the alignment file (Li et al., 2009).

For alignments that had an average pairwise amino acid identity of ≥80% and that showed evidence that the two paralogs were in fact fragments, only the longest fragment of any split protein was retained in the alignment.

The full amplicon length was retained in the alignments for Figs 3B D in order to maximize tree quality.

Unambiguously aligned 312 aa positions were retained in the final alignment.

Sequences that had nearby compensatory changes were retained in the working alignment.

Subsampled datasets were obtained by randomly deleting 90% of the species, but forcing key descendants of fossil-calibrated nodes to be retained in the subsampled alignments.

Only the two most significant alignments were retained in an attempt to avoid spurious alignment to multiple genes from different stickleback linkage groups (for example due to similarity of genes from the same gene family).

In T L tests, voids ahead of the crack tip also grow in the loading direction, although a high degree of alignment is retained in the L direction.

Only biallelic SNPs that showed the same allele in at least two of the ESTs that made up the contig alignment were retained in order to avoid false SNPs that correspond to sequencing and cloning errors.

For each file, the first row titled "Analysis_1", marks with an "*" the columns of amino acids retained in the edited multiple sequence alignments for phylogenetic analysis.