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Table 1 shows the relevant source of the RNA-seq dataset along with several metrics resulting from the alignment of the reads to the reference genome.
For this, conserved regions resulting from the alignment of 26 published partial sequences of such gene were used.
Foliation, planar arrangement of structural or textural features in any rock type, but particularly that resulting from the alignment of constituent mineral grains of a metamorphic rock of the regional variety along straight or wavy planes.
Finally, we compute LB i (q, d) as the similarity score sim q, d) resulting from the alignment ϕ i.
The boxed regions are enlarged in panels C and D. (E – H ) Surface representation of sequence conservation (resulting from the alignment discussed in the legend of Figure 2C ) shows a dramatic concentration at the interface with MELTP.
Because the heterozygous SNPs can be artifacts resulting from the alignment of non-exonic reads to the exome reference, we extracted the corrected genotype at the SNP-coordinates from the backmapped WG BAM file using the pibase software.
Similar(48)
Secondly, the length dependence of dN and dN/ dS ratio is unlikely to result from the alignment between paralogous exonic sequences.
To remove false positives resulting from the sequence alignment errors, the TSVs that were detected by both GMAP and GeneSeqer were used for further analysis.
The tree resulting from the protein alignment confirmed the results obtained with the reference genome analyses.
Information content for PWMs resulting from the gapped alignments and the standard alignments were calculated as described above.
Then, OBDC is compared with DCVP, demonstrating the gains resulting from the pre-alignment phase.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com