Sentence examples for respectively aligned from inspiring English sources

A total of 37 mt and 110 pt protein-coding sequences among the seven Nannochloropsis strains were respectively aligned with MEGA-v4.1-ClustalW, using a maximum of 1,000 iterations for alignment refinement.

To classify these CRISPR elements, DRs and spacers were respectively aligned to bacteria and phage genomes in NCBI non-redundant (NR) database.

All reads were respectively aligned to the reference genome and transcriptome using Bowtie (v.12.7) [ 12].

To mine the SNPs, the two sets (pt and mt) of genome sequences were respectively aligned with MEGA4.1-ClustalW.

The coding and noncoding sequences of each gene from T. muenninki were respectively aligned with the coding and noncoding sequences of homologous genes from both mouse and rat using ClustalX 2.1 (Additional file 3) [ 39].

For example, of approximately 3,000 mouse and approximately 2,600 human lncRNAs only 9% and 16.1%, respectively, aligned to any zebrafish sequence and only seven and nine loci, respectively, mapped to known zebrafish lncRNAs.

The available hsp sequences of T. tyrosinosolvens strain IMMIB D-1411 and Tsukamurella paurometabola strain 2061 (GenBank accession numbers: TTU90204 and AF352578), respectively were aligned using multiple sequence alignment with hierarchical clustering [ 11] http://bioinfo.genotoul.fr/multalin/multalin.html and analyzed to identify conserved regions for the primer design.

Peptides from our first, second and third sets (total 2,279,736, 2,244,375 and 2,010,159 peptides respectively) were aligned to "Reference set" proteins and their alignment behavior is detailed in the results section.

The PTHR10629 domain sequences from the Panther HMM domain database that were found in the studied genomes and other sequences from 15 ascomycetes and 8 basidiomycetes (including five and three of our study, respectively) were aligned with the T-Coffee multiple sequence alignment program [ 53] and analyzed phylogenetically with PhyML [ 54].

The Lch of the devices was defined by various spacing of patterned graphene (2, 4, 6, 8, 10, 12 and 14 μm) and overlapping length and width (25 and 100 μm, respectively) with aligned SWCNTs.

The βC strand of H4 in the MCM2-H3-H4 ternand structure and in a human nucleosome structure (shown in gray and magenta, respectively) are aligned with that in the quaternary structure.