Sentence examples for residues were calculated from inspiring English sources

The solvent-accessible surface areas of m357 residues were calculated on the three-dimensional model by the AREAIMOL program [30].

The SASA values for all the protein residues were calculated using the program ICM [Molsoft LLC, http://www.molsoft.com].

Distances between interacting residues were calculated based on available tri-dimensional Gag structures, with 3 types of measurements: within p17, within p24, and in a p17/p24 complex.

Spatial distances between two protein residues were calculated utilizing the nearest protein atom coordinates supplied in the individual PDB [44] file.

Binding free energies and critical residues were calculated by the molecular mechanics Poisson Boltzmann surface area (MM-PBSA) and molecular mechanics generalized Born surface area (MM-GBSA), respectively.

Second, the R2/R1 ratios for all residues were calculated, and those having R2/R1 ratios significantly larger than the average value (using 1.5 times standard deviation as a cut off) may have conformational exchanges on µs-ms timescale [37].

Carbon derived from the residues was calculated and the decomposition kinetics was fitted with the first-order exponential model.

A Hamiltonian cycle of all complex ensemble residues is calculated for the resulting complete adjacency graph by using an approximation to the minimal spanning tree [12].

The K released by the residues was calculated by subtracting total K mass (i.e., concentration * mass residue) measured in coffee processing residues after 40 weeks from the initial mass of K applied.

The steric hindrance S r) of ligand with the active site residues was calculated using Lennard-Jones potential U r) from AMBER force field [19] Sleft( r right) = sumlimits_{i}^{{N_{L} }} {sumlimits_{j}^{{N_{R} }} {Uleft( {r_{ij} } right) } } (2 where N L and N R are the number of atoms in a ligand and the active site residues, respectively.

The thermal energy that can be generated from the palm residues is calculated from its lower heating value (LHV), followed by the computation of its conversion into electrical energy with an overall conversion efficiency (from palm residues to electric energy) of 25%.