Processing these reads requires aligning them against other sequences: for instance, while mapping them against a reference genome, or when computing overlaps among reads during assembly.
We build phage "phylogenetic" trees by using a composition vector approach called CVTree (Xu and Hao 2009) that does not require aligned sequences but implicitly assumes the sharing of ancestral peptides as phylogenetic signals.
Getting it to work, of course, will require aligning the interests of government, utilities and manufacturers of things like sensors for electricity meters.
From this raw data, he and his team had to create the meshes for 3D printing, which required aligning the photos from all three captures, cleaning up the seams where the different pieces met, and designing a cutaway section and plinth.
Merely aligning all the known orthologs of a given gene will soon require aligning several thousand sequences, and the massive re-sequencing effort currently underway (Siva, 2008) could even mean that within a few decades, multiple comparison methods may be required to align billions of closely related sequences.
Like the FSC, the SSNR requires the aligned input images.
To identify genes under positive selection in IRRB, the DnaSP program requires an aligned set of orthologous sequences [ 32].
Furthermore, we observed a self-assembled perpendicular monolayer-like fiber architectures when the electrospinning was performed above critical rotation speed required for aligned fibers.
The energy source driving the auroral signatures is not fully understood but must require field aligned electric fields that accelerate elections at the feet of the flux tubes of Io and Europa, bodies that interact directly with the incident plasma, and at the foot of the flux tube of Ganymede, a body that is shielded from direct interaction with the background plasma by its magnetospheric cavity.
Quantitative studies in particular require accurately aligned and calibrated volume images of animal structures.
