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The red and green boxes attached to the binding domains indicate the effect of binding: red represents repression while green denotes activation.
A positive log2 fold change represents induction in response to iron deficiency while a negative fold change represents repression in response to iron deficiency.
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Many well-characterized abiotic stress responsive genes were grouped in classes A, F and G, of which 278 genes (class A, representing repression of ABA responses by MYBR1) were repressed by MYBR1, 112 genes (class F, ABA-like activation) were activated by MYBR1 and 254 genes (class G, representing ABA-specific activation) were unaffected by MYBR1.
We decide whether the things we wear or leave behind represent repression or liberation or nothing much in particular.
The first column on the left represents the expression of the targets of the MR where blue and red represent repression and activation, respectively.
Richard McKane, who translated this week's poem, wrote: "It is my belief that the Akhmatova poems of the 30s and 40s will become the texts of poetry under repression". If there's rather more unhappy competition to represent repression than this allows, it reminds us of the continually searing power of Akhmatova's major, innovative works such as Requiem.
The symbols represent repression of gene expression.
Regulatory parameters represent repression (if < 0), activation (if > 0) or no interaction (if ≈ 0).
Arrows represent positive regulation, bars represent repression, and white bullets, together with the dashed lines, indicate signaling events.
The connectivity between network components in the absence or presence of Tc are shown in Figure 2, where nodes represent genes and arrows represent repression or activation.
To denote potential (positive and negative) interactions in the network, the parameters a i, j and b i, k were estimated, with positive values representing activating connections and negative values representing repression.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com