Sentence examples for represents an alignment from inspiring English sources

Figure 1 shows an example of these steps, where (a) represents the input sequences, (b) represents an alignment of step (i), (c) shows the dendrogram obtained from step (ii), and (d) shows a pair-wise group-alignment in step (iii).

The first data set represents an alignment of 2522 nt positions consisting of a near complete SSU rRNA gene in combination with a segment of the LSU rRNA gene (SSU/LSU data set; Additional file 5: Figure S2).

The comparison of the two genomes is illustrated in fig. 1, which represents an alignment of the entire nucleotide sequences of the two phages, showing an identity of ≥95% over 94% of their genomes.

We represent an alignment A as a1, a2, …, a L where L is the alignment length and are the alignment state at position i.

Figure 1 shows two such candidate trees, one representing an alignment of two short amino acid sequences and one representing a secondary structure of an RNA molecule.

Profile HMMs are probabilistic models representing an alignment of multiple amino acid sequences that are very effective at identifying related sequences [ 52].

One of the most common ways to represent an alignment is using the familiar row and column matrix format of sequence alignments using the single letter abbreviations for residues (Fig. 1).

Each possible path through the alignment matrix represents a potential alignment for the two sequences.

The alignment-based features are represented with a 113-dimension vector where each dimension or postition represents a numeric alignment score.

The practice on the ground, therefore, represents a perfect alignment with the information provided by politicians and civil servants in Whitehall.

The first turn is of the double chain reversal type, the second is of the edgewise type, and the third represents a new alignment, the V-shaped type.