Applying the procedure to about 6.6 M reads from Sanger sequencing, 90.6% of which represented paired clone ends, 211,374 initial seed contigs of unique sequences were generated.
This instance has a solution: using numbers to represent corresponding pairs (i.e., 1 represents pair 1 and analogously for 2 and 3), the sequence of pairs 1311322 is a solution.
The functional representation, although obscure, is a perfectly adequate way to represent pairs, since it fulfills the only conditions that pairs need to fulfill.
Recall that we were able to represent pairs using functions, and therefore we can represent recursive lists using functions as well.
Each node represents a news outlet and the lines between them represent pairs of outlets in which one or both of the outlets linked frequently to the other.
The network is modeled as a graph, in which nodes represent the underwater sensors and surface gateways, and edges represent pair-wise communication links.
72 cycles of images were collected, representing pairs of 36-bp reads.
Links between modules represent pair-wise relationships where the more heavily weighted links (i.e. thicker lines) indicated greater co-author pairing between modules.
Therefore, we assume that neighboring amino acids within the selected phage-displayed peptides may represent pairs of juxtaposed amino acids residues on the protein surface.
Five out of these pairs could be found within a single cluster, 31 represent pairs between clusters and in the majority of 84 pairs at least one gene did not belong to any cluster.
"(" and "." represent paired and unpaired bases, respectively.
