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The two seagrass species Zostera marina and Posidonia oceanica were represented by expressed sequence tag data.
Experimentally, S. salar genes have proven challenging to characterize because of the complexities resulting from assembling large numbers of partial mRNA sequences represented by expressed sequence tags (ESTs) obtained from these duplicated and other closely related sequences.
These phylogenies were examined to determine whether soybean and M. truncatula homologs within synteny blocks were more closely related to each other than to homologs elsewhere in the genomes, as represented by expressed sequences.
Numbers of colonies screened and sequenced, putative A-superfamily gene sequences, unique sequences, non-artefactual alleles and loci recovered from venom duct transcripts of Conus species, as well as the percentages represented by expressed genes in the genomic profiles of A-superfamily of each species.
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Although most of the SAE-enriched genes are represented by low expressed transcripts, the top 30 highly expressed SAE-enriched genes accounted for about 20% of the total SAE mRNA, suggesting that a limited number of genes may dictate the specific pattern of biological processes dominating in the SAE under steady-state conditions.
Furthermore, targets that are represented by highly expressed transcripts are more likely to be expressed as proteins (98-10098-100%ranscripthathat show highest expression levels).
A second group is represented by genes expressed in female glands and in adult males, without any expression in female carcasses: these are identified as SG,M in Table 2.
We also performed GO functional analysis to identify the biological processes that were most represented by the expressed genes.
Molecular functions and pathways represented by genes expressed at lower levels in CD34+ cells, compared to more differentiated hematopoietic cells.
Subsequently, techniques like the Gene Ontology terms enrichment allow for identification of the biological processes represented by differentially expressed genes.
For the purpose of the ARM analysis (see Section 2.3), items were represented by differentially expressed genes.
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