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This representation is generated with the help of high utility closed itemsets (HUCI) and their generators.
For each atom pair, the string representation is generated in both reading directions.
In the framework, an image representation is generated via the following steps.
Finally, the final image representation is generated by concatenating the histograms from all subregions together.
The canonical representation is generated for each structure by the system, and the different tautomers of the same molecule must have the same canonical representation.
After the network representation is generated, the software stores the data in a MySQL database which can be used to create the link and junction objects and to visualize the road network automatically.
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In this investigation a devolatilized Illinois No. 6 coal char atomistic representation was generated, using Fringe3D and additional Perl scripts, coupled with the ReaxFF reactive force field for hydrocarbon combustion.
For each atom in an OEMol object that represents a PubChem substance or compound record, a SMARTS representation was generated according to the encoding described in Tables 4 and 5.
Movie S1: The 3D representation was generated with confocal microscopy images, using ImageJ (http://rsb.info.nih.gov/ij) and edited with iMovie HD (Apple Computer Inc .. Following stimulation with GM/TNF, cells were fixed for 24 h in a solution 0.1 M cacodylate buffer [Na(CH3 2AsO2⋅3H2O], pH 7.3, containing freshly prepared 4% paraformaldehyde and 0.2% glutaraldehyde.
For each of these arrays, a genomic representation was generated from a mixture of sorghum lines using the PstI-based complexity reduction method previously described [ 26].
From this gene centric database, a 2D reaction centric SBML (System Biology Markup Language, http://www.sbml.org) representation was generated using an in house Java (Oracle Corporation) application.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com