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In our differential representation analysis taxa belonging to the Anaerolineae increased in wild vs cultivated rhizosphere.
GMCR constitutes a flexible approach to the representation, analysis, and understanding of a strategic conflict.
The representation, analysis and summarization of the results of such experiments can be difficult and complex.
DIF is designed as an extensible repository of representation, analysis, transformation, and scheduling of data flow language.
The resulting large data sets raise issues of data representation, analysis, and interpretation, which must be resolved.
CAD has been traditionally used to assist in engineering design and modeling for representation, analysis and manufacturing.
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In parallel, an independent pathway over-representation analysis was also performed using the GeneSpring program.
The scores and location windows are almost identical to those found in our over-representation analysis.
All the conserved targets for conserved miRNA families were used for over-representation analysis, and both conserved and nonconserved targets for conserved miRNA families were used for under-representation analysis.
Likewise, approaches more elaborate than plain over-representation analysis might be better suited for capturing the regulatory effects within clusters, see [9], for example.
Briefly, genes were uploaded to InnateDB and pathway and gene ontology (GO) term over-representation analysis was carried out as previously described [54].
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