Section 4 provides a dataset analysis, which reports alignment rates of Bowtie2, BWA, and BLASR on corrected and uncorrected PacBio datasets.
Reads that passed this filter (those that mapped uniquely to the genome, or those that did not map at all, such as splice junction reads) were then aligned to the S. cerevisiae transcriptome with bowtie, allowing two mismatches and only reporting alignments of reads that mapped uniquely in the transcriptome (bowtie -v 2 -m 1 -a --norc --bestratarata).
While most companies have a reasonable level of confidence in their abilities to align to larger business objectives, only one in 10 reports complete alignment of a language learning program to the company's strategic direction.
We report magnetic alignment of aluminum nitride (AlN) platelets and the outstanding material properties of its polymer composite.
In 2008, Lamont-Doherty reported an "alignment" of earthquakes between Peekskill, N.Y., and Stamford, Conn., that were discerned only after the installation of seismographs in 1973.
Manos et al. (2001) reported an alignment of 635 bp for 179 Fagaceae taxa.
For this DynDom pair, Structal reported an alignment of 52 residues with rmsd 0.40 Å; MultiProt's alignment was 54 with rmsd 0.52 Å.
Because the genome sequence of C. septempunctata L. has not been reported, sequence alignment of the experimental unigenes was performed using the known genomes of other species.
In this report, the alignment of two genetic maps was successfully performed to assign the linkage groups of the new genetic map with previous genetic maps.
In TopHat, if the fragment f has multiple alignments x and y, TopHat retains only alignment y and does not report alignment x, when one of the following conditions is satisfied (tests are applied in order): Mismatch rule: x has more mismatches than y.
