Intra-replicate comparison between microarray and RT-qPCR generated data for the same genes indicated a good correlation (Figure 1).
We defined the events to be regulated if they had |delta PSI| > 0.1 in at least one replicate comparison between cell lines.
As the publication does not provide a list of 98 replicated CpGs, a comparison between replicated results of their and our hits was not possible.
In this article we addressed the aim of replicating a comparison between the SPIDER, PICOS and PICO search tools.
Finally, to replicate the comparison between epidemiological assessment and predictive accuracy of the test [ 15], we assessed sensitivity, specificity, PPV and NPV for increasing AUC, in high-risk groups with a frequency lower, equal or higher than the disease risk.
However, the method still produces estimates at the boundary in our between-replicate comparisons similar to all ML methods.
Expression data were estimated as the average of normalized intensity signal values of replicates, and comparisons between F2 bm3 or AS225 with the normal F2 line were based on expression value ratios.
The microarray analysis contained two additional experimental replicates for each treatment and cultivar, preventing a direct one-to-one comparison between replicates; thus, mean expression (transcript) and abundance (protein) values were computed for each treatment and cultivar prior to regression analysis.
A comparison between two replicate boreholes drilled 64 m apart shows differences in measured mixing ratio profiles that exceed the experimental error.
Also, process evaluation enables improvement of the intervention, enables others to replicate the program, facilitates future comparison between studies (Hulscher et al., [ 51]) and enables the transition from research evidence into health practice (Grol and Grimshaw, [ 82]).
