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The size of the total assemblies differed between CL Brener and Esmeraldo strains due to differences in the repetitive area of the non-coding region; a strain-specific 236-nt deletion was found in the Esmeraldo coding region.
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Consequently, we limit our purchase considerations to stocks that are at or very near their historically repetitive areas of undervalue and hold them until they complete the cycle at their historically repetitive areas of overvalue.
Short reads and repetitive areas, however, make it difficult to build sufficiently long contigs from NGS reads.
The amount of repetitive areas differed between the species, whereof M. perniciosa and P. radiata were the most outstanding with a repetitive content of 26.5 and 20.3 %, respectively.
We used RepeatMasker 3.2 (www.repeatmasker.org; Smit et al. 2004) to remove from the set events that were in repetitive areas of the genome.
One library is usually smaller than 500 bp, and the other, commonly referred to as a mate-pair library, is typically larger than 2 kb and up to 5 kb, to facilitate sensitive SV detection across a widened SV size-spectrum and in repetitive areas of the genome.
The majority occur in the repetitive central area of the gene (exons 45 53)–designated the major deletion hot spot [8] [10] because of the gene's propensity to undergo recombination in this region [43], [44].
On the contrary, in the repetitive texture areas, there could have same minimum cost in several locations.
The policies are ramblingly comprehensive, repetitive in areas, and show that at least someone is listening to the minutiae of the country's public gripes.
An example of a less selective criterion is removing all hairpins that fall in highly repetitive genomic areas.
These control regions were roughly evenly distributed across chromosomes, and selected at random from non-repetitive intergenic areas of the genome.
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