Sentence examples for repeated loci from inspiring English sources

If a threshold exists for DNA slippage, observations of tandem duplications at very short repeated loci should result from chance insertion or indel slippage.

Using this stringent approach and paired-end information, we were able to uniquely map read pairs to these repeated loci, including through short stretches of non-unique sequence.

Specifically, we visualized a lower bound to mappability across these repeated loci by plotting the uniqueness of 100mers as a mappability track.

Finally, multiple sequence alignments will be used to establish phylogenies and calculate nucleotide substitution rates in both silent and non-silent positions in order to date the successive events that have occurred at tandem repeated loci and identify the evolutionary forces (mutation/selection).

As each of these PCR products correspond to a mixture of sequences from multiple repeated loci, it is possible that some copies of these repeats show variation with respect to the presence of HpaII recognition sites, due to polymorphisms relative to the sequence used for PCR primer design.

Genes with repeated locus tags were removed from the analysis, for a final total of 4428 genes with locus tags in MG1655.

Previously, we identified tandem repeat loci, MIRUs (6 ), and VNTRs (3 ) in the genome of M. ulcerans.

After this filtering, our final data set consisted of 201,102 and 25,052 [A/T]n and [GT/CA]n repeat loci, respectively.

We genotyped nine tandem repeat loci bearing 2 8 bp motifs from 345 P. vivax infections collected from three Asian countries and from five locations in Colombia.

Consistent with allozymes and nucleotide sequence polymorphism, the dinucleotide repeat loci reveal minimal structure across four populations of D. pseudoobscura.

We have isolated, characterized and mapped 33 dinucleotide, three trinucleotide and one tetranucleotide repeat loci from the four major chromosomes of Drosophila pseudoobscura.