Sentence examples for repeated alignment from inspiring English sources

After repeated alignment and classification, the final projection map showed two striking features.

As on a suffix tree identical sequences are collapsed on a single path, time is saved by avoiding repeated alignment of identical subsequences.

Number of links in original alignment, number of links in repeated alignment, number of links mutually included in both alignments and F-score.

The results of genotypes exhibits discontinuous array of allele sizes and repeated alignment of the duplicate sequences of its amplified products proved that both mitochondrial and chloroplast segments of DNA deletion or insertion were the major source of polymorphism.

After adding sequences we repeated alignments, chimera checking, tree building, and taxonomic assignment.

We further improve this heuristics by avoiding repeated alignments of reads to interiors of long contigs, because these parts of the assembly never change.

To improve alignments, we calculated ML guide trees from the first alignments using RAxML v. 7.7.5 (Stamatakis 2006) with a WAG+Γ model, and then repeated alignments with the new guide trees.

The standard deviations in space and time of the repeated alignments were 2.8 nm and 0.1 s for Abp1, 5.5 nm and 0.3 s for Rvs167 and 12.9 nm and 0.6 s for Sla2.

Consensus maps based on repeated alignments to a reference genome can provide valuable information to confirm or correct a given sequence contig, and often reach far into gaps or even bridge them.

(E ) Repeated alignments of the same average trajectories (Abp1-GFP, Rvs167-GFP and GFP-Sla2) using five independent data sets of simultaneous two color acquisitions (Abp1-mCherry-GFP, Rvs167-GFP with Abp1-mCherry, and GFP-Sla2 with Abp1-mCherry).

Since 14,768 pyrosequencing reads did not match the ZF genome, we repeated the alignment using the mapping algorithm SHRiMP, which allows for introduction of insertions/deletions in the alignment.