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Repeat landscape photographs support our main findings which suggest that both rocky, upland habitats and rivers have not been transformed substantially by land use practices in Namaqualand.
Thirteen repeat landscape photographs, taken during the dry seasons of 1868 and 2008, were analyzed for various environmental indicators and show a significant improvement of vegetation cover.
When plotted logarithmically on a genomic scale, these frequencies form a repeat landscape, whereby high copy repetitive regions are easily distinguished from low copy, putatively genic regions.
How does the organization of the piRNA pathway change with varying genome size and repeat landscape?
In general, genes on the pathogenicity chromosome are dispersed within the repeat landscape.
Overall, MDR analysis in barley provided relatively few novel repeat sequences, but this is mainly attributable to the already well documented repeat landscape of the Triticeae.
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Based on the diverse repeats we observe, we propose that such screening may serve as an efficient expedient for gaining a rapid but representative first insight into the repeat landscapes of sparsely characterized mitochondrial chromosomes.
In the present study, using strategically designed oligonucleotide substrates, we determined the ability of human apurinic/apyrimidinic endonuclease 1 (APE1) to cleave at apurinic/apyrimidinic (AP) sites in a collection of tandem DNA repeat landscapes involving telomeric and CAG/CTG repeat sequences.
Divergent repeat landscapes have been also observed in snake genomes (Castoe et al. 2011).
Broader understanding of genomic repeat landscapes in snakes may shed greater light on this question.
Comparison of two snake genomes, spanning ∼100 My of snake evolution, revealed extensive differences in their genomic repeat landscapes.
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