Sentence examples for removed sequences that from inspiring English sources

We further removed sequences that did not align over the same span of nucleotide positions.

Hence, we submitted each of our single-gene alignments to ML reconstructions with bootstrap replications and systematically removed sequences that displayed ambiguous phylogenetic positions for both paralogy and gene transfers.

We also removed sequences that lacked two PROSITE (http://prosite.expasy.org/scanprosite/, PS50090) R repeats [ 14, 72].

We then further removed sequences that were read only once and 6,870,535 reads remained.

We did an initial alignment of the R2R3 MYBs of each species using ClustalW2.0 and then removed sequences that lacked the R2R3 repeats.

The rigorous filtering by recursive BLAST search removed sequences that are part of gene families notably reduced the amount of data.

The trCYK algorithm performs local structural RNA alignment in a manner that uses secondary structural information (correlated base pairs) where possible, and reverts to sequence alignment when a truncation has removed sequence that would be base paired.

MUSCLE alignments were inspected visually to remove sequences that were obvious alignment errors.

After removing sequences that were vector-only, low quality, or polyA-only reads, 2362 ESTs were recovered with an average read length of 770 bases.

Because Aβ40 trimers were purified off Coomassie-stained gels, RNA pools also were pre-cleared using Coomassie-stained HAWP filters after the 8th and 12th SELEX rounds to remove sequences that would potentially bind the Coomassie stain.

After trimming off low-quality sequences, we compared miRNA candidates ranging from 16nt to 40 nt in length to the silkworm genome sequence for putative origins, and those with perfect matches were searched against Rfam and our custom-curated insect ncRNA databases to remove sequences that are neither siRNAs nor miRNAs based on their sequence and structural features.