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In total 30 putative chimeras were identified and removed from the read datasets.
The barcodes were then removed from the read sequences.
These sequences were removed from the read, and the index and UMI were added to the read name.
If the LTR is found, it is removed from the read and the resulting sequence is kept for further analysis to avoid mapping aspecific amplification products.
UMI information is first identified in each read, and then it is removed from the read and the read is annotated with the UMI sequence.
Once artifacts have been removed from the read counts, the next step is for RAPIDR to create a baseline using a set of reference samples with known outcomes and fetal sex.
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In 2002 the extremist party retaliated to jibes in the author's first novel, Such a Long Journey, by demanding it be removed from the reading syllabus of Mumbai University.
First, adaptor contamination was removed from the reads.
The PCR adaptors were removed from the reads using the standard Ion Torrent pipeline.
Primer, MID and ribosomal RNA sequences were trimmed or removed from the reads.
After 454 sequencing, the 5′ and 3′ adaptors were removed from the reads.
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