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Please see the caveat about "rings" seen in exposure-corrected HRC-I data for more information on why the particle background is removed by default.
Repetitive reads that align to multiple locations are removed by default.
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Smaller isolated voids were by default removed by the noise filter in processing the images.
The adapter sequence was removed using CUTADAPT [ 45],[ 46] followed by barcode trimming, quality trimming (−t 20, −l 50), artifact removal, and quality filtering (−q 20, −p 90) using FASTX-TOOLKIT (http://hannonlab.cshl.edu/fastx_toolkit/). Mitochondrial, chloroplast and ribosomal reads were removed by bowtie2 [ 47] using the default setting.
For 16S data, ambiguous alignment sites were removed by using Gblocks ver. 0.91 b [ 19] with a default parameter.
Poorly aligned regions were removed by Gblocks version 0.91b (Castresana 2000; Talavera and Castresana 2007) using default block parameters.
In this case, skip the opening by using the default radius value of 0. Small artificial objects will be removed by inverse hole filling.
Probe sets that were called absent by default MAS5 criteria in all 24 samples were removed before further processing.
First, Chrome 14, which was just released in the Dev channel today, removes window scrollbars by default.
Stop orders prompt the clinician (either nurse or physician) to remove the catheter by default after a certain time period has elapsed or condition has occurred, unless the catheter remains clinically appropriate.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com