Multilocus sequence typing (MLST) was carried out according to the protocol described on the E. coli MLST website (http://mlst.warwick.ac.uk/mlst/dbs/Ecoli), and the phylogenetic relationships of reference strains were analysed based on the concatenated sequences (3,423 bp) of seven housekeeping genes (adk, fumC, gyrB, icd, mdh, purA, and recA) used for MLST.
WinFS provides three types of primitive relationships – Holding Relationship, Reference Relationship and Embedding Relationship.
It is then reduced and solved by using a scale-bridging technique based on the Dyson's equation that relates a defect GF to a reference GF and on the asymptotic relationship of the reference lattice-statics GF (LSGF) to the continuum GF (CGF) of the semi-infinite substrate.
For both the pectinate topology and the Neurospora phylogeny, the relationship of the reference taxa to its sister taxon was not consistently well resolved.
The relationship of the reference strain and the test strains based on the presence and divergence of genes was determined with Bayesian-based algorithms implemented through MR BAYES 3.1 [ 30], as previously described [ 31].
The same thing happens if you put "friend" under the relationship of your references, or "was my supervisor, but now still friends".
Further, there appears to be no apparent relationship between choice of reference management software and perceived functionality or usability.
Furthermore, Mohr's circle and strut-and-tie modeling was used to obtain the complete load displacement relationships of the reference and retrofitted joint sub-assemblies.
Copy genes number and gene location were assessed by mRNA transcripts mapping, showing a closer relationship of San Marzano with reference genome.
In addition, the relationship between the number of reference genes and the accuracy in RT-qPCR data normalization has not been clearly addressed.
