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Using a genomic relationship matrix increased the accuracy of breeding values relative to using a pedigree relationship matrix.
In terms of predicting ability, the proposed TA matrix is an improvement upon the classical numerator relationship matrix (NRM) and the realized relationship matrix (RRM).
A is the relationship matrix.
GBLUP uses a genomic relationship matrix (G) instead of the numerator relationship matrix (A).
A partial relationship matrix is a relationship matrix that describes relationships only according to genetic origin.
A single-step method extends the usual pedigree-based method by replacing the additive relationship matrix constructed from pedigree by an additive relationship matrix that combines the marker-based relationship matrix for genotyped animals with the pedigree-based relationship matrix.
Next, a relationship matrix is computed from this matrix representation.
This paper suggests that the pedigree-based relationship matrix should be adjusted instead of the marker-based relationship matrix.
Therefore, it is necessary to adjust the marker-based relationship matrix to the pedigree-based relationship matrix.
This analysis was performed by substituting average numerator relationship matrix with marker-based relationship matrix [ 17] using observed allele frequencies.
Henderson [ 10] has presented a simple recursive method for computing the inverse of a relationship matrix, A -1, without the need to form the relationship matrix A itself.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com