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We forced the random networks to preserve the node degrees to mimic the degree distribution of the original TFKO regulatory relation pairs [ 28].
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It is noteworthy that for the 10th and 11th features, we only check the existence of a target relation pair in CTD or MeSH but not the actual curated articles in either resource.
Molecular similarity refers to the relation between pairs of molecules, whereas molecular diversity is based on pair-wise relations of a population of molecules (e.g. a compound collection).
A program is then seen in an extensional way: it is a binary relation between pairs of states of an LTS.
Start with the Completeness axiom, which says that an agent can compare, in terms of the weak preference relation, all pairs of options in \(S\).
If we know the conditions imposed by the reduction relation on pairs of theories or properties, we will also know what these anti-reductionist theories are bound to deny.
A structural link expresses a static, time-independent relation between pairs of entities.
More precisely, we created a mapping between the UMLS SN (McCray, 2003) and BioTop (Beisswanger, 2008), and assessed through this mapping how each resource contributes to the interpretation of the relation between pairs of co-occurring concepts.
The edge matrix is a (sparse) N × N matrix and represents the relation between pairs of vertices, where A ij is a weight w ij if the ith vertex is connected to the jth vertex and 0 otherwise.
The methodology is based on the existence of synthetic-lethal relation between pairs of genes: two genes are synthetically lethal if their simultaneous mutation leads to inviable organism, while their separate mutation has no substantial effect on the organism's fitness.
Supervenience relations are typically understood as relations between pairs of classes of properties.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com