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However, the related representative work is not very abundant.
This is done by calculating the average dinucleotide relative abundance difference in a size dependent manner between the input sequence and a (closely related) representative genome sequence.
Amino acid sequences of phage RNRs were aligned with corresponding sequences from their known bacterial hosts or related representative bacteria (Additional files 1 and 2) with the PRALINE profile based alignment tool [ 98].
Instead, they are put in touch with a Related representative if the application hits a snag.
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Three additional but more distantly related representatives of core Corvoidea as well as representatives from other major passerine lineages were also included.
In these systems, the diploid parental (or related) representatives are known and can be used to identify duplicated homeologs in the allotetraploids.
A distantly related thermophilic representative has been cultured from a Yellowstone hot spring [60].
Two further concepts related to representative materials emerged.
Seven (TTN, MATN3, DST, HDAC4, TSHR, CCDC141, GALK2) of the 14 genes were reported to be related to representative economic traits of each breed [ 63- 68] (Additional file 8).
Based on this preliminary phylogenetic tree, we selected the closest homologues of the DeepAnt-EC39 fosmid and C. reinhardtii sequences and a subset of more distantly related homologues representative of the genetic diversity of these domains.
The majority (74%; 26/35) of nucleotide sequences were closely related to representative HAV genotype IA strains and classified as genotype IA (21 strains of 2008 and 5 strains of 2009), and the remaining 26% (9/35) were classified as genotype IB (3 strains of 2008 and 6 strains of 2009).
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