Transcription factor enrichment analysis was performed with the Regulatory Genomics Toolbox (http://www.regulatory-genomics.org).org
Conversely, body plan stability requires high conservation of the cis-regulatory regions of toolbox genes.
Another, and less explored approach is to assume a toolbox of available gene regulatory mechanisms, and then sample many combinations of these to test how well they perform a given task [12] [14].
We have therefore established a valuable toolbox to study gene regulatory networks with broad applicability.
Second, we will include more analysis functions, such as building regulatory networks and genetic community discovery, into the analysis toolbox.
Transposable elements (TEs) have the potential to produce broad changes in the genomes of their hosts, acting as a type of evolutionary toolbox and generating a collection of new regulatory and coding sequences.
The reported study provides a versatile toolbox for rapidly constructing a large family of prokaryotic regulatory elements.
It is a toolbox that can be used to integrate expression, metabolic and regulatory information into a genome scale model.
Being able to examine the entire enzymatic toolbox at once, using gene expression signatures, can shed light on regulatory mechanisms that might not be possible to bridge with a hypothesis driven approach.
The spectrum toolbox contains a set of enablers (tools) to allow 5G systems to operate under different regulatory and spectrum sharing scenarios.
