Sentence examples for refined orientations from inspiring English sources

(E) Refined orientations and centers of all particles: refineall ptemps.dat.dat

In a subsequent 3D classification run with four classes, an angular sampling of 1.8° was combined with local angular searches around the refined orientations, and the refined single model was used as a starting model.

Another possibility would be to use neuronavigation to refine orientation during model construction.

(A) Used eliminateort to refine orientation and center of all particles with cross-common line phase residue method.

The program Frealign (Grigorieff, 2007) was used to refine orientation, position, defocus distance and relative pixel size for each micrograph using the original scanned data without binning.

Scanning step size: 1.27; minimum and maximum Fourier radius: 3 and 9; the step size for refining orientations of particles: default value; the step size for refining centers of particles: default value; threshold for phase residue: 55.   (F) Made FFT of new orientation and center files: masktrans newOrt.dat 129 hev.

Our modeling procedures aimed at refining the orientation of cytochrome c within this lobe.

The computational study, introduced above, also refined the geometrical orientation of an oligomeric π-bonded vinyl terminated oligoethylene chain; a non-negligible (2 kcal mol−1) stabilisation energy is observed with the second metal site, a pre-requisite for ethyl branching [174].

When all candidate orientations are refined independently a total of about 6480 iterative refinement steps are needed to find the global optimum among all candidate orientations.

For the standard exhaustive scanning at 5° intervals a total of 168,634 candidate orientations must be processed while at 60° rotational intervals only 108 candidate orientations are refined.

Subsequently, particle orientations were refined with ∼10 cycles of projection matching without imposed symmetry.