Sentence examples for refine the sequence from inspiring English sources

The 'alignment tuning' option of nest was used to refine the sequence alignment, to avoid the unlikely occurrence of insertions and deletions within secondary structure elements.

The identification of new examples of SANT and SLIDE domains provides an opportunity to refine the sequence definitions of these domains and search for their presence in other proteins.

In the future, we aim to further refine the sequence extraction functions to allow the extraction of various sequence segments or segment combinations from one genome or multiple genomes belonging to particular taxonomy groups.

By comparing differences in diversity across the enhancer region in populations with a history of milk drinking with non-milk drinking groups, we also attempted to further refine the sequence region that is likely to have been important and identify other candidate loci.

Various versions of the chloroplast genome sequence were used as a reference in alignreads to further refine the sequence based on new assemblies.

In considering the results, it is important to bear in mind that these examples can be combined to further refine the sequence set.

Fourth, the NePhe score can further refine the sequence-based OTE prediction for FPs.

After refining the sequence alignment between RIG-I and Hef (Figure 5A), we used it as a template to build a homology-derived 3D model of the helicase domain of RIG-I (Figure 5B).

Rates of synonymous and nonsynonymous substitution were calculated by first identifying orthologs between bovine ET3-1 and other sequenced isolates by BLASTP, then refining the sequence alignments using CLUSTALW and calculating the rates by Nei and Gojobori's algorithm [28], [72], [73].

Kim et al refined the sequence to a 200-bp critical enhancer region (−8126 to −7927 relative to the first nucleotide of GenBank accession number BC021919, NIH) that could be used to drive reporter gene expression specifically in ON-bipolar cells (Kim et al, 2008; Lagali et al, 2008).

Here we have identified and refined the sequences of 11 α and 5 β integrin subunits from the Ciona genome.