Sentence examples for refine the alignment from inspiring English sources

In summary, our method takes advantage of (i) second-order Gaussian derivatives detectors for localizing the markers [21], (ii) a cluster analysis to identify them throughout a series and (iii) iterative procedures to refine the alignment process.

Nerve derived signals disperse prepatterned clusters that are not contacted by the nerve, and thus refine the alignment between the pre- and postsynaptic apparatus [6], [7], [8].

In the next step we refine the alignment between homologues in PALI database, obtained through a recognized rigid body method, using match of protein blocks in the local structurally variable regions.

MatchedIonsFinder was used to refine the alignment results.

We just used our pairwise potential to refine the alignment generated by local alignment potential as follows.

ScanIndel employs BLAT to refine the alignment of split reads, since it is known that BLAT is much better than short read aligners at mapping sequences with gaps.

The de novo transcript assembly was input into PASA [ 40] to refine the alignment-based gene models with mRNA evidence.

GATK6 was used to refine the alignments near insertion/deletion (indel) sites.

The PRRN program was then used to refine the alignments to improve the precision of those with lower sequence similarities.

Once the sequences of the 90e/genomic contig pairs were retrieved, exonerate[ 62] was used to refine the alignments over the splice sites (using as parameters model = est2genome and bestn = 10).

Our framework scans the initial mapping file from a gapped NGS aligner and refines the alignment of the soft-clipped reads meeting tiered criteria.